BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E05SP1|AL430063
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1310 1461 0.0
>3x_Contig1310
Length = 7790
Score = 1461 bits (736), Expect = 0.0
Identities = 791/802 (98%), Gaps = 7/802 (0%)
Strand = Plus / Minus
Query: 127 acatatactttattcaaaactcatgtatttctaacatttgcactacataaacatttgata 186
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 7790 acatatactttattcaaaactcatgtatttctaacatntgcactacataaacatntgata 7731
Query: 187 gacactaaaagccaatcttttacccccttagtacagcttttaaatgctagtatactaagc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7730 gacactaaaagccaatcttttacccccttagtacagcttttaaatgctagtatactaagc 7671
Query: 247 gagagtttttaaaggtcgcgatttactccagttcgtcttgaaccctttgctgattcaaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7670 gagagtttttaaaggtcgcgatttactccagttcgtcttgaaccctttgctgattcaaaa 7611
Query: 307 taaatcatcaacactttttgaatgttttccccagatataaagaaaatgacaaacaagatt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7610 taaatcatcaacactttttgaatgttttccccagatataaagaaaatgacaaacaagatt 7551
Query: 367 taagaacttcgtttgaattatccaaattaacttcttatataccggaaacggtacatatca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7550 taagaacttcgtttgaattatccaaattaacttcttatataccggaaacggtacatatca 7491
Query: 427 cctggctgagacattcgctactcaagactctaatactgagttattcagcctttcagatat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7490 cctggctgagacattcgctactcaagactctaatactgagttattcagcctttcagatat 7431
Query: 487 cgctgttttcgatcgcttttctaattttggaagagaccagggtattcaacaaggtattat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7430 cgctgttttcgatcgcttttctaattttggaagagaccagggtattcaacaaggtattat 7371
Query: 547 tcctcgaccggaactatttattataagaactaagttgtattttatggttggtatattttg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7370 tcctcgaccggaactatttattataagaactaagttgtattttatggttggtatattttg 7311
Query: 607 taatgacgaagaaacttacagctcaagagaaactgaatcgaaaaccgataccgacagctt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7310 taatgacgaagaaacttacagctcaagagaaactgaatcgaaaaccgataccgacagctt 7251
Query: 667 gtgtgttttgccatgagaagcatttacaatgtgatcttggtagaccctgccaaaactgct 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7250 gtgtgttttgccatgagaagcatttacaatgtgatcttggtagaccctgccaaaactgct 7191
Query: 727 cgaagcgtgggattggtgacacatgtagggataaggagcgtaa-sccaggaaacgcggac 785
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7190 cgaagcgtgggattggtgacacatgtagggataaggagcgtaagcccaggaaacgcggac 7131
Query: 786 cgcggaaagttaagaagg-acgtgagg-ttcggcgtcgacaaagtcagagatatctaata 843
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7130 cgcggaaagttaagaaggaacgtgaggtttcggcgtcgacaaagtcagagatatctaata 7071
Query: 844 ctattaatc-acaactgat-cccgttattaatactgcaactgccgttagcaatagac-aa 900
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7070 ctattaatcaacaactgatccccgttattaatactgcaactgccgttagcaatagacaaa 7011
Query: 901 awtcgagt-aaataataaaggc 921
| |||||| |||||||||||||
Sbjct: 7010 attcgagtaaaataataaaggc 6989
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6754
Number of Sequences: 1807
Number of extensions: 6754
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)